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r-cran-qtl (1.40-8-1) unstable; urgency=medium
* New upstream version
* Convert to dh-r
* Canonical homepage for CRAN
* d/watch: version=4
* Recommends: ruby since code contains ruby code
-- Andreas Tille <tille@debian.org> Fri, 11 Nov 2016 09:29:19 +0100
r-cran-qtl (1.39-5-2) unstable; urgency=medium
* Fix installation of test data inside the package
* Fix autopkgtest
-- Andreas Tille <tille@debian.org> Fri, 29 Apr 2016 11:15:13 +0200
r-cran-qtl (1.39-5-1) unstable; urgency=medium
* New upstream version
* cme fix dpkg-control
* Testsuite changed from r-cran-unit to r-cran-testthat
-- Andreas Tille <tille@debian.org> Wed, 27 Apr 2016 23:46:05 +0200
r-cran-qtl (1.37-11-1) unstable; urgency=medium
* New upstream version
-- Andreas Tille <tille@debian.org> Tue, 22 Sep 2015 21:55:04 +0200
r-cran-qtl (1.36-6-1) unstable; urgency=medium
* New upstream version
* cme fix dpkg-control
* fix DEP5 short name
-- Andreas Tille <tille@debian.org> Thu, 02 Jul 2015 15:36:46 +0200
r-cran-qtl (1.33-7-1) unstable; urgency=medium
* New upstream version
* Normalised source package name
-- Andreas Tille <tille@debian.org> Mon, 18 Aug 2014 15:17:44 +0200
qtl (1.32-10-1) unstable; urgency=medium
* New upstream version
* Adapt autopkgtest to be similar to other test scripts
-- Andreas Tille <tille@debian.org> Mon, 23 Jun 2014 13:35:41 +0200
qtl (1.30-4-1) unstable; urgency=medium
* New upstream version
* debian/upstream -> debian/upstream/metadata
* cme fix dpkg-control
* drop "Recommends: r-cran-rlecuyer" since this is neither packaged
for Debian nor mentioned inside source code
* Update debian/README.test to explain how to sensibly test the package
* Provide autopkgtest
* Enhance long description (avoid using-first-person-in-description)
-- Andreas Tille <tille@debian.org> Tue, 18 Mar 2014 16:05:24 +0100
qtl (1.27-10-1) unstable; urgency=low
* New upstream version
* debian/control:
- debhelper 9 (also debian/compat)
- normalised using `cme fix dpkg-control`
- better wording in long description
- drop versioned Build-Depends from r-base-dev because the
version in latest stable is sufficient
-- Andreas Tille <tille@debian.org> Wed, 15 May 2013 14:07:47 +0200
qtl (1.25-15-2) unstable; urgency=low
* Rebuilt for R version 3
* Bumped policy to 3.9.4
-- Steffen Moeller <moeller@debian.org> Tue, 02 Apr 2013 00:48:41 +0200
qtl (1.25-15-1) unstable; urgency=low
* New upstream version
- suggesting rlecuyer R package
- major fix for interpretation of numeric IDs in checkcovar
-- Steffen Moeller <moeller@debian.org> Sat, 18 Aug 2012 21:42:30 +0200
qtl (1.23-16-2) UNRELEASED; urgency=low
* debian/upstream:
- Fixed yaml Syntax
- Fixed authors syntax
- Added URL
-- Andreas Tille <tille@debian.org> Mon, 26 Mar 2012 21:29:33 +0200
qtl (1.23-16-1) unstable; urgency=low
* New upstream version
* debian/control:
- Standards-Version: 3.9.3 (no changes needed)
- Build-Depends: r-base-dev (>= 2.14.2~20120222)
* debian/rules:
- Remove R:Depends substitution variable which is now
included in /usr/share/R/debian/r-cran.mk
- Code is trivial enough to remove licensing comment
* Split debian/README.Debian up into README.test and
debian/upstream
* debian/docs: Install README.test
* debian/copyright: Rewritten to match DEP5 and verified using
cme fix dpkg-copyright
-- Andreas Tille <tille@debian.org> Fri, 23 Mar 2012 23:54:28 +0100
qtl (1.22-21-1) unstable; urgency=low
* New upstream version.
-- Steffen Moeller <moeller@debian.org> Mon, 09 Jan 2012 14:45:00 +0100
qtl (1.21-2-2) unstable; urgency=low
* Rebuilded using latest R
Closes: #646052
* Standards-Version: 3.9.2 (no changes needed)
* Fixed Vcs fields
-- Andreas Tille <tille@debian.org> Fri, 21 Oct 2011 15:30:24 +0200
qtl (1.21-2-1) unstable; urgency=low
* New upstream version
-- Steffen Moeller <moeller@debian.org> Mon, 15 Aug 2011 10:59:08 +0200
qtl (1.20-15-1) unstable; urgency=low
* New upstream version
* Debhelper 8 (control+compat)
-- Andreas Tille <tille@debian.org> Mon, 14 Mar 2011 09:31:31 +0100
qtl (1.19-20-1) unstable; urgency=low
* New upstream version
-- Andreas Tille <tille@debian.org> Wed, 26 Jan 2011 10:04:53 +0100
qtl (1.18-7-1) unstable; urgency=low
* New upstream version
* Standards-Version: 3.9.1 (no changes needed)
-- Andreas Tille <tille@debian.org> Wed, 24 Nov 2010 11:21:26 +0100
qtl (1.16-6-2) unstable; urgency=low
* Added myself to Uploaders
* Debhelper 7
* Moved from pkg-bioc to debian-med SVN repository
* Updated README.Debian
* Added upstream-metadata.yaml
* debian/{control,rules}: Depends: ${R:Depends}
* Source format 3.0 (quilt)
* Fixed spelling of Debian Med (removed dash)
-- Andreas Tille <tille@debian.org> Fri, 04 Jun 2010 14:12:49 +0200
qtl (1.16-6-1) unstable; urgency=low
* New upstream version
- Integration of MQM mapping of mapqtl
- Many smallish or larger improvements
* Updated standards-version
- Added debian/source/format indication
-- Steffen Moeller <moeller@debian.org> Fri, 04 Jun 2010 13:05:47 +0200
qtl (1.14-2-1) unstable; urgency=low
* dependency on R 2.7.10
* new upstream version with only minor changes
-- Steffen Moeller <moeller@debian.org> Wed, 28 Oct 2009 23:09:18 +0000
qtl (1.13-7-1) unstable; urgency=low
* new upstream version with various bug fixes
* bumped standard compliance to 3.8.3 (no changes required)
-- Steffen Moeller <moeller@debian.org> Mon, 28 Sep 2009 13:39:40 +0200
qtl (1.12-26-1) unstable; urgency=low
* new upstream version
- support for recombinant inbred lines (RIL)
- simpler notation to reference pseudonmarkers
* license change to GPL-3
* adapted section to gnu-r
-- Steffen Moeller <moeller@debian.org> Thu, 09 Jul 2009 13:52:50 +0200
qtl (1.11-12-1) unstable; urgency=low
* new upstream version
-- Steffen Moeller <moeller@debian.org> Thu, 14 May 2009 13:47:06 +0200
qtl (1.10-28-1) unstable; urgency=low
* new upstream version
- resolves inconsistencies in copyright
- various changes affecting stability or performance
- more on http://www.rqtl.org/STATUS.txt
* debian/copyright updated
* removed PDFs from source tree
-- Steffen Moeller <moeller@debian.org> Fri, 20 Feb 2009 18:50:00 +0100
qtl (1.09-43-2) unstable; urgency=low
* Dirk requested to be removed from the uploaders list
* Allowing Debian-Med community maintenance albeit
package remaining under pkg-bioc control for now.
* Added Vcs-Browser and Vcs-Svn fields.
-- Steffen Moeller <moeller@debian.org> Mon, 29 Sep 2008 17:18:20 +0200
qtl (1.09-43-1) unstable; urgency=low
* New upstream release.
-- Steffen Moeller <moeller@debian.org> Wed, 30 Jul 2008 16:42:46 +0200
qtl (1.08-56-1) unstable; urgency=low
* New upstream release.
* Establishing compatibility to R release 2.7.
-- Steffen Moeller <moeller@debian.org> Fri, 11 Apr 2008 11:48:30 +0200
qtl (1.07-12-2) unstable; urgency=low
* [debian/control]
- updated description
- adhering to latest standards version
* [debian/copyright]
- updated Steffen's email adress
* Recompilation will induce transition to gfortran
-- Steffen Moeller <moeller@debian.org> Tue, 11 Mar 2008 10:41:54 +0100
qtl (1.07-12-1) unstable; urgency=low
* New upstream version.
* Major changes:
- Upstream completely rewrote the effectscan function, so that it
now uses multiple imputation results and deals with the X chromosome
appropriately.
- Upstream fixed an important bug in fitqtl, in which incorrect
results could be obtained if covariates were placed before QTL terms
in the formula.
-- Steffen Moeller <moeller@debian.org> Wed, 10 Oct 2007 13:43:39 +0200
qtl (1.06-43-1) unstable; urgency=low
* New upstream release
* debian/control: (Build-)Depends: updated to r-base-dev (>= 2.4.0)
-- Dirk Eddelbuettel <edd@debian.org> Sun, 12 Aug 2007 15:30:27 -0500
qtl (1.05-2-1) unstable; urgency=low
* New upstream release
-- Dirk Eddelbuettel <edd@debian.org> Thu, 9 Nov 2006 17:57:04 -0600
qtl (1.04-53-1) unstable; urgency=low
* New upstream release
-- Dirk Eddelbuettel <edd@debian.org> Sun, 29 Oct 2006 11:17:51 -0600
qtl (1.04-52-1) unstable; urgency=low
* New upstream release
* debian/control: (Build-)Depends: updated to r-base-dev (>= 2.4.0)
-- Dirk Eddelbuettel <edd@debian.org> Sat, 28 Oct 2006 11:26:41 -0500
qtl (1.03-14-1) unstable; urgency=low
* New upstream release
-- Dirk Eddelbuettel <edd@debian.org> Fri, 21 Jul 2006 18:16:41 -0500
qtl (1.02-26-1) unstable; urgency=low
* New upstream release
* New maintainer as Steffen's NM progress appears to have stalled
* debian/rules: Simplified to cdbs-based one-liner sourcing r-cran.mk
* debian/control: Hence Build-Depends: updated to r-base-dev (>= 2.3.0)
* debian/control: Standards-Version: increased to 3.7.2
* debian/watch: Updated file to version: 3
-- Dirk Eddelbuettel <edd@debian.org> Thu, 8 Jun 2006 21:13:27 -0500
qtl (1.01-9-1) unstable; urgency=low
* New upstream version.
[ Dirk Eddelbuettel ]
* Rename upstream tarball correctly as .orig.tar.gz before building package
to prevent accidental build as a Debian native package
* debian/post{inst,rm}: No longer call R to update html help index
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Thu, 1 Dec 2005 15:20:00 +0100
qtl (0.99.24-1) unstable; urgency=low
* New upstream version.
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Sun, 15 May 2005 23:54:03 +0200
qtl (0.98.57-2.1) unstable; urgency=low
* NMU
* Coordinated with Maintainer as part of larger R 2.0.0 update effort
* Rebuilt under R 2.0.0
* debian/control: Updated Build-Depends: and Depends: accordingly
-- Dirk Eddelbuettel <edd@debian.org> Sat, 9 Oct 2004 20:55:08 -0500
qtl (0.98.57-2) unstable; urgency=low
* added postinst script
* added postrm script too [ Dirk Eddelbuettel ]
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 19 Sep 2004 23:24:00 +0100
qtl (0.98.57-1) unstable; urgency=low
* New upstream version.
- Proper support of the X chromosome
- many little improvements
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 19 Sep 2004 01:06:00 +0100
qtl (0.97.22-1) unstable; urgency=low
* New upstream version.
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 14 Jan 2004 10:55:00 +0100
qtl (0.97.21-5) unstable; urgency=low
* Retrieval of genetical map from EnsEMBL (http://www.ensembl.org)
* Also implemented access to EnsEMBL via RMySQL, package r-cran-mysql
available on mentors.debian.net
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 11 Nov 2003 13:14:00 +0100
qtl (0.97.21-4) unstable; urgency=low
* Retrieval of physical map from EnsEMBL (http://www.ensembl.org)
Requires RODBC.
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 11 Nov 2003 13:14:00 +0100
qtl (0.97.21-3) unstable; urgency=low
* added demo, code copied from "A starting point" help to the qtl library
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 11 Nov 2003 13:14:00 +0100
qtl (0.97.21-2) unstable; urgency=low
* dec and quote parameters passed to internally called R base function
read.table for read.cross
* second parameter (dir) interpreted as file if file unset
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 3 Nov 2003 22:05:03 +0100
qtl (0.97.21-1) unstable; urgency=low
* Initial Debian Release (closes: #214601)
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Tue, 8 Oct 2003 09:02:03 +0100
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