1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
|
maq (0.7.1-7) unstable; urgency=medium
* Team upload
[ Andreas Tille ]
* Moved packaging from SVN to Git
* hardening=+all
[ Canberk Koç ]
* Autopkgtest
-- Canberk Koç <canberkkoc@gmail.com> Tue, 23 Aug 2016 00:28:13 +0300
maq (0.7.1-6) unstable; urgency=medium
* moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
* Add missing manpages
* Fix Mayhem issue
Closes: #716112
-- Andreas Tille <tille@debian.org> Wed, 16 Dec 2015 15:34:33 +0100
maq (0.7.1-5) unstable; urgency=low
[ Charles Plessy ]
* renamed debian/upstream-metadata.yaml to debian/upstream
[ Andreas Tille ]
* debian/upstream:
- Removed duplicated entry DOI
- Moved PMID to references
* debian/source/format: 3.0 (quilt)
* debian/reference: removed because references are kept in
debian/upstream (also removed from debian/docs)
* debian/control:
- Standards-Version: 3.9.3 (no changes needed)
- Fixed Vcs fields
- Build-Depends: dh-autoreconf
- Dropped from Build-Depends: quilt, cdbs
* debian/patches/20_prevent_-64_option.patch: Dropped in favour
of using dh-autoreconf
* debian/rules: converted to dh
* debian/copyright: cme fix dpkg-copyright
* debian/patches/gcc-4.7.patch: Enable building with g++-4.7
Closes: #667270
* debian/README.source: Removed because there is no point any
more to explain how to use quilt
-- Andreas Tille <tille@debian.org> Wed, 25 Apr 2012 14:20:16 +0200
maq (0.7.1-4) unstable; urgency=low
* Development of Maq stopped in 2008. Its successors are BWA and SAMtools.
(debian/control, debian/maq.doc-base).
* DEP-5 conformant debian/copyright file, checked with ‘config-edit’.
* Use Debhelper 8 (debian/control, debian/compat).
* Collected various information in debian/upstream-metadata.yaml.
* Incremented Standards-Version in debian/policy to reflect
conformance with Policy 3.9.1 (no changes needed).
-- Charles Plessy <plessy@debian.org> Sun, 13 Mar 2011 11:35:38 +0900
maq (0.7.1-3) unstable; urgency=low
* Distribute scripts that are not installed by upstream’s
makefile in /usr/share/maq (debian/install).
* Incremented Standards-Version in debian/policy to reflect
conformance with Policy 3.8.2 (no changes needed).
* debian/patch: made headers conformant with current draft of DEP3.
-- Charles Plessy <plessy@debian.org> Fri, 17 Jul 2009 22:00:02 +0900
maq (0.7.1-2) unstable; urgency=low
* Enable LARGEFILE64_SOURCE to prevent a problem with zlib on
64bit archs (Thanks to Peter Green <plugwash@p10link.net> for
the patch)
Closes: #506009
* Standards-Version: 3.8.1 (no changes needed)
-- Andreas Tille <tille@debian.org> Thu, 16 Apr 2009 15:56:09 +0200
maq (0.7.1-1) unstable; urgency=low
* New upstream release 0.7.1 (Closes: 505820)
- Accepts reads shorter than 127 bp (63 bp before).
- .map alignment changes and not backward-compatible.
- Reversion to short reads possible with --enable-shortreads.
* New upstream release 0.6.8
- New features for the 1000 genome project.
- Error dependency coefficient reduced from 0.93 to 0.85.
- Added mapvalidate command.
- Support generating GLF format.
- The mapcheck command can optionally dump additional information.
* debian/patches:
- 20_perl_path.patch deleted because accepted upstream.
- 10_prevent_-64_option.patch reorganised to only modify configure.ac
and forwarded upstream.
- 20_prevent_-64_option.patch changes configure and can be regenerated
by running autoreconf.
* debian/control: typo corrected in short description (Closes: #492979)
* debian/reference: BibTeX reference downloaded from
http://genome.cshlp.org/citmgr?gca=genome;18/11/1851 with abstract
removed because it is a copyrighted work.
* debian/README.Sources renamed README.source to comply with Policy.
-- Charles Plessy <plessy@debian.org> Sun, 16 Nov 2008 22:52:04 +0900
maq (0.6.7-1) unstable; urgency=low
[ Charles Plessy ]
* Initial release (Closes: #489836)
[ Andreas Tille ]
* Rudely deleted -m64 option from configure because multiarch
building leads to several problems
-- Andreas Tille <tille@debian.org> Wed, 16 Jul 2008 12:01:33 +0200
|
