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Source: kineticstools
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif@debian.org>
Build-Depends:
debhelper (>= 9),
dh-python,
python-all,
python-setuptools,
python-docutils,
python-pbcore (>= 1.2.8),
python-pbcommand (>= 0.3.22),
python-numpy (>= 1.6.0),
python-h5py (>= 1.3.0),
python-scipy (>= 0.9.0),
# Test-Depends:
python-nose,
Standards-Version: 3.9.8
Homepage: https://github.com/PacificBiosciences/kineticsTools
Vcs-Git: https://anonscm.debian.org/git/debian-med/kineticstools.git
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/kineticstools.git
Package: kineticstools
Architecture: all
Depends:
${misc:Depends},
${python:Depends},
python-kineticstools (>= ${source:Version}),
python-pkg-resources
Description: detection of DNA modifications
Tools for detecting DNA modifications from single molecule, real-time (SMRT®)
sequencing data. This tool implements the P_ModificationDetection module in
SMRT® Portal, used by the RS_Modification_Detection and
RS_Modifications_and_Motif_Detection protocol. Researchers interested in
understanding or extending the modification detection algorithms can use these
tools as a starting point.
.
This package is part of the SMRTAnalysis suite.
Package: kineticstools-data
Architecture: all
Depends: ${misc:Depends}
Description: detection of DNA modifications -- data files
Tools for detecting DNA modifications from single molecule, real-time (SMRT®)
sequencing data. This tool implements the P_ModificationDetection module in
SMRT® Portal, used by the RS_Modification_Detection and
RS_Modifications_and_Motif_Detection protocol. Researchers interested in
understanding or extending the modification detection algorithms can use these
tools as a starting point.
.
Kineticstools is part of the SMRTAnalysis suite.
This package contains the package data files.
Package: python-kineticstools
Section: python
Architecture: any
Depends:
${misc:Depends},
${shlibs:Depends},
${python:Depends},
kineticstools-data (= ${source:Version}),
Suggests: python-pybigwig
Description: detection of DNA modifications (Python 2 library)
Tools for detecting DNA modifications from single molecule, real-time (SMRT®)
sequencing data. This tool implements the P_ModificationDetection module in
SMRT® Portal, used by the RS_Modification_Detection and
RS_Modifications_and_Motif_Detection protocol. Researchers interested in
understanding or extending the modification detection algorithms can use these
tools as a starting point.
.
This package is part of the SMRTAnalysis suite and contains the backend
Python 2 library.
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