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Source: infernal
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
libperl4-corelibs-perl,
autotools-dev
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/infernal.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/infernal.git
Homepage: http://infernal.janelia.org/
Package: infernal
Architecture: any-amd64 any-i386
Depends: ${shlibs:Depends},
${misc:Depends}
Description: inference of RNA secondary structural alignments
Infernal ("INFERence of RNA ALignment") searches DNA sequence
databases for RNA structure and sequence similarities. It provides an
implementation of a special variant of profile stochastic context-free
grammars called covariance models (CMs). A CM is like a sequence
profile, but it scores a combination of sequence consensus and RNA
secondary structure consensus, so in many cases, it is more capable of
identifying RNA homologs that conserve their secondary structure more
than their primary sequence.
.
The tool is an integral component of the Rfam database.
Package: infernal-doc
Architecture: all
Section: doc
Depends: ${shlibs:Depends},
${misc:Depends}
Description: inference of RNA secondary structural alignments – documentation
Infernal ("INFERence of RNA ALignment") searches DNA sequence
databases for RNA structure and sequence similarities. It provides an
implementation of a special case of profile stochastic context-free
grammars called covariance models (CMs). A CM is like a sequence
profile, but it scores a combination of sequence consensus and RNA
secondary structure consensus, so in many cases, it is more capable of
identifying RNA homologs that conserve their secondary structure more
than their primary sequence.
.
This package provides the documentation which is shipped with the
code of infernal.
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