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#!/usr/bin/make -f
# -*- makefile -*-
# debian/rules file for beast-mcmc
# Andreas Tille <tille@debian.org>
# GPL
#export DH_VERBOSE=1
PACKAGE := $(shell dpkg-parsechangelog | sed -n 's/^Source: //p')
JAVA_HOME := /usr/lib/jvm/default-java
DEBJAR := /usr/share/java
CLASS_PATH := /usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/share/ant/lib/ant-nodeps.jar:/usr/share/ant/lib/ant-junit.jar:$(JAVA_HOME)/lib/tools.jar:$(DEBJAR)/beagle.jar:$(DEBJAR)/mpj.jar:$(DEBJAR)/org.boehn.kmlframework.jar:$(DEBJAR)/itext1-1.4.jar:$(DEBJAR)/junit4.jar:$(DEBJAR)/figtree.jar:lib/colt.jar:$(DEBJAR)/options.jar:$(DEBJAR)/mtj.jar:$(DEBJAR)/jam.jar:$(DEBJAR)/jdom1.jar:$(DEBJAR)/jebl.jar:$(DEBJAR)/commons-math.jar:/usr/lib/R/site-library/rJava/jri/JRI.jar
# to run the test suite
JAVA := $(JAVA_HOME)/bin/java
ANT_HOME := /usr/share/ant
ANT_BIN := $(ANT_HOME)/bin/ant
ANT_ARGS := -Dcompile.debug=true -Dcompile.optimize=true
%:
dh $@ --with javahelper
CFLAGS:=$(shell dpkg-buildflags --get CFLAGS)
LDFLAGS:=$(shell dpkg-buildflags --get LDFLAGS)
PDFLATEX:=pdflatex -interaction=batchmode
override_dh_auto_build:
# move tests requiring fest.swing out of the way
mv src/test/beast/app/beauti debian/fest_swing_tests
dh_auto_build
mv debian/fest_swing_tests src/test/beast/app/beauti
override_dh_compress:
dh_compress --exclude=.pdf
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