1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
|
beast-mcmc (1.8.4+dfsg.1-1) unstable; urgency=medium
* Drop packaging tools from upstream source
* Add missing copyright
* Fix section for all binary packages
Closes: #829174
-- Andreas Tille <tille@debian.org> Fri, 01 Jul 2016 11:08:37 +0200
beast-mcmc (1.8.4+dfsg-1) unstable; urgency=medium
* New upstream version
* debian/rules: export LC_ALL=C.UTF-8 to cope with encoding issues
* Upload to unstable (main)
-- Andreas Tille <tille@debian.org> Tue, 28 Jun 2016 09:26:11 +0200
beast-mcmc (1.8.3+dfsg-1) experimental; urgency=medium
* New upstream version
* Upload to official Debian (experimental)
* cme fix dpkg-control
-- Andreas Tille <tille@debian.org> Thu, 02 Jun 2016 14:41:23 +0200
beast-mcmc (1.8.2-1) unstable; urgency=medium
* Adapt d/watch to changed release names
* Rename new binary tracer to beast-tracer
Closes: #813086
-- Andreas Tille <tille@debian.org> Fri, 29 Jan 2016 16:03:31 +0100
beast-mcmc (1.8.2~754b844-2) unstable; urgency=medium
* Depends: libnetlib-java
* Force exact version match with libnucleotidelikelihoodcore0
* Add mtj.jar explicitly to classpath in wrapper script
* Build tracer.jar as well
-- Andreas Tille <tille@debian.org> Thu, 28 Jan 2016 10:39:20 +0100
beast-mcmc (1.8.2~754b844-1) unstable; urgency=medium
* New upstream version
* d/watch: Point to Github (moved from Google Code)
* Build-Depends: libcolt-free-java (instead of libcolt-java which leaves
libmtj-java the last remaining dependency from contrib)
* drop debian/get-orig-source since uscan can deal with all issues
* d/copyright:
* Adapt source location
* More Files-Excluded
* Bumped version in versioned Build-Depends: libhmsbeagle-dev
(>= 2.1.2+20150609)
* Bumped version in versioned Build-Depends: libjam-dev
(>= 0.1.20140824)
* Moved from SVN to Git
-- Andreas Tille <tille@debian.org> Sun, 19 Jul 2015 20:15:51 +0200
beast-mcmc (1.8.0-1) unstable; urgency=medium
* New upstream version
* libnucleotidelikelihoodcore0: Architecture: amd64
* d/watch: Stick to 1.x series of beast-mcmc
* cme fix dpkg-control
* fix encoding issue
* Explicitly add multiarch library PATH to wrapper script to make sure
libhmsbeagle-jni will be found
* Add test but do not add autopkgtest control file for the moment
(since contrib is not tested anyway)
* Fix package description
Closes: #716790
-- Andreas Tille <tille@debian.org> Tue, 30 Sep 2014 18:15:36 +0200
beast-mcmc (1.7.5-1) unstable; urgency=low
* New upstream version
* Add debian/README.source explain why we stick to 1.7.x series for
the moment
-- Andreas Tille <tille@debian.org> Thu, 30 May 2013 15:04:56 +0200
beast-mcmc (1.7.4-2) experimental; urgency=low
* Add copyright license info for file (Closes: #698497).
- src/dr/math/matrixAlgebra/RobustSingularValueDecomposition.java
-- Olivier Sallou <osallou@debian.org> Sat, 23 Feb 2013 20:55:28 +0100
beast-mcmc (1.7.4-1) experimental; urgency=low
* New upstream version (adapted patches)
* debian/{control,rules}: use default java implementation
thanks for the patch to James Page <james.page@ubuntu.com>
Closes: #683509
* debian/control:
- rename beast-mcmc-lib to libnucleotidelikelihoodcore0
- Standards-Version: 3.9.4 (no changes needed)
- do not depend from xterm any more
- versioned (Build-)Depends from libhmsbeagle-java
* Remove now unneeded lintian overrides
* debian/patches/create_soname.patch: Create soname for library
* debian/rules: silence pdflatex for better readable build logs
-- Andreas Tille <tille@debian.org> Mon, 17 Dec 2012 16:43:17 +0100
beast-mcmc (1.6.2-3) unstable; urgency=low
* rename pixmap for menu to avoid name space conflict
Closes: #680483
-- Andreas Tille <tille@debian.org> Fri, 06 Jul 2012 11:30:19 +0200
beast-mcmc (1.6.2-2) unstable; urgency=low
* debian/control: rename beast-doc to beast-mcmc-doc
Closes: #679394
For consistency reasons also rename beast-examples to
beast-mcmc-examples
-- Andreas Tille <tille@debian.org> Fri, 29 Jun 2012 11:24:51 +0200
beast-mcmc (1.6.2-1) unstable; urgency=low
* Initial release. (Closes: #552101)
-- Andreas Tille <tille@debian.org> Tue, 05 Jun 2012 14:38:11 +0200
|
