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Source: amap-align
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 9)
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/amap-align.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/amap-align.git
Homepage: http://code.google.com/p/amap-align/
Package: amap-align
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Description: Protein multiple alignment by sequence annealing
AMAP is a command line tool to perform multiple alignment of peptidic
sequences. It utilizes posterior decoding, and a sequence-annealing
alignment, instead of the traditional progressive alignment method. It is
the only alignment program that allows one to control the sensitivity /
specificity tradeoff. It is based on the ProbCons source code, but
uses alignment metric accuracy and eliminates the consistency
transformation.
.
The java visualisation tool of AMAP 2.2 is not yet packaged in Debian.
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