Package: srst2 / 0.2.0-4

Metadata

Package Version Patches format
srst2 0.2.0-4 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
check_command_line_arguments.patch | (download)

database_clustering/get_all_vfdb.sh | 5 5 + 0 - 0 !
database_clustering/get_genus_vfdb.sh | 5 5 + 0 - 0 !
2 files changed, 10 insertions(+)

 check command line arguments before processing


add_usr_bin_python_to_scripts.patch | (download)

database_clustering/VFDB_cdhit_to_csv.py | 1 1 + 0 - 0 !
database_clustering/VFDBgenus.py | 1 1 + 0 - 0 !
database_clustering/csv_to_gene_db.py | 3 2 + 1 - 0 !
3 files changed, 4 insertions(+), 1 deletion(-)

 add missing interpreter line


fix_test.patch | (download)

tests/test_srst2.py | 10 8 + 2 - 0 !
1 file changed, 8 insertions(+), 2 deletions(-)

 update test for recent version


fix_grep_call.patch | (download)

scripts/srst2.py | 3 2 + 1 - 0 !
1 file changed, 2 insertions(+), 1 deletion(-)

 do not fail if search string contains special shell characters