Package: pbgenomicconsensus / 2.1.0-1
Metadata
Package | Version | Patches format |
---|---|---|
pbgenomicconsensus | 2.1.0-1 | 3.0 (quilt) |
Patch series
view the series filePatch | File delta | Description |
---|---|---|
spelling.patch | (download) |
doc/VariantCallerFunctionalSpecification.rst |
2 1 + 1 - 0 ! |
fix spelling error |
verbose testing.patch | (download) |
Makefile |
6 3 + 3 - 0 ! |
make tests run verbosely The cram tests in particular don't output anything until the suite is finished. On slower buildd's, this might make the build time-out due to apparent lack of activity and report FTBFS. |
disable arrow tests.patch | (download) |
Makefile |
4 2 + 2 - 0 ! |
disable tests for arrow These tests need ConsensusCore2, and the version currently packaged in Debian is newer than this GenomicConsensus version and not compatible. The tests are thus expected to fail in this situation. |
no poa convenience script.patch | (download) |
tests/cram/poa-all4mer.t |
2 1 + 1 - 0 ! |
don't use poa convenience script in test suite We can't install that convenience script because it conflicts with another package, so change the test suite to use `variantCaller --algorithm=poa` instead. |
missing testdata.patch | (download) |
tests/unit/test_tool_contract.py |
27 16 + 11 - 0 ! |
disable test require missing package pbtestdata pbtestdata is not yet available in Debian (due to now resolved issue of missing explicit license terms), so we cannot run this test. |
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