Package: gromacs / 2016.1-2

Metadata

Package Version Patches format
gromacs 2016.1-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
readme.patch | (download)

README | 8 7 + 1 - 0 !
1 file changed, 7 insertions(+), 1 deletion(-)

 edit readme to explain that this is not an official upstream build
copyright file.patch | (download)

CMakeLists.txt | 5 4 + 1 - 0 !
1 file changed, 4 insertions(+), 1 deletion(-)

 install only a single copyright file
 Avoid duplication of COPYING and debian/copyright.  A symlink is provided
 between the two.
reproducible builds.patch | (download)

cmake/gmxSetBuildInformation.cmake | 11 6 + 5 - 0 !
1 file changed, 6 insertions(+), 5 deletions(-)

 reproducible build modifications
 By default, GROMACS embeds build time / host / username information.  This
 patch replaces those with values compatible with reproducible builds
 (https://wiki.debian.org/ReproducibleBuilds).
doxygen.patch | (download)

docs/doxygen/gmxtree.py | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 fix documentation ftbfs with doxygen >= 1.8.11
disable cpuinfotest.patch | (download)

src/gromacs/hardware/tests/CMakeLists.txt | 4 3 + 1 - 0 !
1 file changed, 3 insertions(+), 1 deletion(-)

 disable cpuinfotest.supportlevel test
 This test is still a hard failure on less common architectures instead of
 a warning.  Disable for now, as it should not fail the build.
hurd disable numa test.patch | (download)

src/gromacs/hardware/tests/hardwaretopology.cpp | 3 3 + 0 - 0 !
1 file changed, 3 insertions(+)

 [hurd-i386] disable hardwaretopologytest.numacacheselfconsistency
 On Hurd only, this test reports zero memory.  lstopo(1) looks normal,
 so this is probably just a hwloc limitation; disable until solved properly
 either here or in hwloc.