ARBDB/ad_load.cxx | 27 20 + 7 - 0 !
CORE/arb_progress.cxx | 8 8 + 0 - 0 !
CORE/arb_progress.h | 3 3 + 0 - 0 !
3 files changed, 31 insertions(+), 7 deletions(-)

show progress while arb is loading a database
 (needed as indicator/splash screen while ARB is launching)

SH/arb_launcher | 7 4 + 3 - 0 !
1 file changed, 4 insertions(+), 3 deletions(-)

 backported security fix

lib/desktop/arb.desktop | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 add keywords to arb.desktop

ARBDB/adGene.cxx | 2 1 + 1 - 0 !
ARBDB/adsocket.cxx | 2 1 + 1 - 0 !
ARB_GDE/GDE_event.cxx | 2 1 + 1 - 0 !
CORE/arb_progress.h | 4 2 + 2 - 0 !
CORE/arb_strarray.cxx | 2 1 + 1 - 0 !
GDE/CLUSTAL/amenu.c | 6 3 + 3 - 0 !
GDE/CLUSTALW/interface.c | 2 1 + 1 - 0 !
GENOM/GEN_gene.cxx | 6 3 + 3 - 0 !
NTREE/NT_tree_cmp.cxx | 2 1 + 1 - 0 !
PRIMER_DESIGN/primer_design.cxx | 2 1 + 1 - 0 !
SL/FAST_ALIGNER/fast_aligner.cxx | 2 1 + 1 - 0 !
STAT/st_quality.hxx | 2 1 + 1 - 0 !
TOOLS/arb_consensus_tree.cxx | 2 1 + 1 - 0 !
TOOLS/arb_gene_probe.cxx | 30 15 + 15 - 0 !
WINDOW/AW_xfig.cxx | 2 1 + 1 - 0 !
15 files changed, 34 insertions(+), 34 deletions(-)

 fix lintian detected spelling errors

lib/arb_tcp_org.dat | 10 3 + 7 - 0 !
1 file changed, 3 insertions(+), 7 deletions(-)

 change nameservers to be per-user
 By default, ARB shares one "name server" database across an installation.
 This is historical and no longer a useful default for "unadministered" 
 use of ARB. The patch changes the config to create separate name databases
 for each user, avoiding the necessity for a directory writeable by all
 ARB users.

GDE/Makefile | 2 1 + 1 - 0 !
GDEHELP/MENUS/phyml_20130708.menu | 2 1 + 1 - 0 !
2 files changed, 2 insertions(+), 2 deletions(-)

 use phyml package instead of version source distributed with arb

Makefile | 18 1 + 17 - 0 !
1 file changed, 1 insertion(+), 17 deletions(-)

 skip compiler version check at all